PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0003s0179.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 219aa    MW: 23605.2 Da    PI: 4.5866
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0003s0179.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.8e-183888155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + y+GVr++  r rWv+e+r+p   +k++r++lg+f t e+Aa+a++ a+++l+g
  Kalax.0003s0179.1.p 38 PVYRGVRRRN-RDRWVCEVREP---NKKTRIWLGTFPTLEMAARAHDVAALALRG 88
                         68*****887.8******9998...347*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.7E-143888IPR001471AP2/ERF domain
SMARTSM003802.3E-2639102IPR001471AP2/ERF domain
PROSITE profilePS5103221.7333996IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-313998IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-213998IPR016177DNA-binding domain
PRINTSPR003672.8E-74051IPR001471AP2/ERF domain
CDDcd000186.18E-225198No hitNo description
PRINTSPR003672.8E-76278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDASASSNDD VSSSAPLLAA SNPKRRAGRK KFTETRHPVY RGVRRRNRDR WVCEVREPNK  60
KTRIWLGTFP TLEMAARAHD VAALALRGSR ACLNFADSAW RLPVPGSLDA GEIRRAAVEA  120
AEMFRPGTAS FDDGAGSSGS YGGDDDFDDV AIISSDGGSA IGGGGVFELD VEYFLGVNSR  180
ELMVEMAEGL MVAPPPYWEA EGCDQVESDD VSLWSYSF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858047.11e-70PREDICTED: dehydration-responsive element-binding protein 1C-like
RefseqXP_012858875.11e-70PREDICTED: dehydration-responsive element-binding protein 1C-like
SwissprotQ9FJ932e-63DRE1D_ARATH; Dehydration-responsive element-binding protein 1D
TrEMBLA0A022PVI81e-70A0A022PVI8_ERYGU; Uncharacterized protein
TrEMBLA0A022PXG41e-70A0A022PXG4_ERYGU; Uncharacterized protein
STRINGSolyc03g026270.1.15e-68(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-26C-repeat/DRE binding factor 2